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… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and hemicellulose … Centers, the Joint BioEnergy Institute and the Great Lakes Bioenergy Research Center. O’Malley is also affiliated …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … get back to a regular schedule. I’m going to kick things off today with my interview with the Director of the Joint … that the JGI’s Annual User Meeting is coming up, August 30th through September 1st. Three days of great science, and …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find earlier in the … And because the average fungal genome, I don’t know, is 30 megabases? Basidiomyetes might get to 50. Some of them go to …

… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering … Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing data, along …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … and his colleagues developed first worked on a reference dataset that included genome sequences known to be … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 …

… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … many structures as you can, and then you use that trained dataset to interrogate the new data, to try and find those … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… A preview of how large-scale single cell genomics complements … A single sample was then used to produce a paired amplicon dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a single cell dataset of nearly 500 single cell genomes. The single cell …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … across at least two of the facilities, and generate datasets beyond what each of these facilities could generate …

… as had been originally thought. The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …