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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, … of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … eight of these weird bacteria. And we proposed to the Joint Genome Institute. DAN UDWARY: Oh, that’s where we come in. …
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Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … these sgRNAs, cloning them alongside CRISPR-Cas9 into an expression vector to create an sgRNA plasmid library. The team …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … is endemic to northern Australia but is increasingly farmed in other countries for essential oil production. The … in the journal Heredity . In order to understand the gene expression and function of these TPS genes, Australian …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of … to highlight how they are addressing the world’s most pressing energy and environmental challenges.  The invited …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 …
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