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How to Target a Microbial Needle within a Community Haystack
… capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team … Microbiology has developed, tested and deployed a pipeline to first target cells from communities of uncultivated … binding site, resulting in target cells that give off a much brighter signal. Cells from many natural environments …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in …
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Mitochondrial ATP generation is more proteome efficient than glycolysis
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Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle
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Microbes in thawing permafrost: the unknown variable in the climate change equation
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Sequencing Technologies
… and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE … users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while … approaches, testing various platforms to see what works best for applications. The team works hand in hand with the …
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Tracking the Origins of Methane-Producing Microbes
Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over … , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. Department of Energy (DOE) Joint … report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic …
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JGI Scientists Pen Genome Watch Articles
Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … with the Wellcome Sanger Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, …
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Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost
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Mindfully Moving JGI
… in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production … sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines …
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FICUS
… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … proposals within the focused topic areas that can be completed on an accelerated timeline as compared …
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