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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … virus-host dynamics in nature. In the last few years, mapping the planet’s viral diversity has advanced …
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Draft genome of five Cupriavidus plantarum strains: agave, maize and sorghum plant-associated bacteria with resistance to metals
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Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass
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High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology … metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 8674:00585-7. Nayfach S et al. 2021. …
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Sequence‐Based Introgression Mapping Identifies Candidate White Mold Tolerance Genes in Common Bean
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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy
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Genetic dissection of natural variation in oilseed traits of camelina by whole‐genome resequencing and QTL mapping
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … Armed with a better understanding of the alga’s stress resistance and ability to adapt to changing environmental … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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Crops as Tough as World Cup Turf
In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …
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