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… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence … DAP-seq on GEO Accession Viewer … Datasets …

… Microbial cells infected by viruses undergo metabolic … from The Ohio State University and the University of Michigan studying how virus infections cause significant … ecosystems models. Next, the researchers are working towards better understanding how nutrient availability, or …

… Analysis reveals the microbial community involved in a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … bioremediate toxic substances has led to the development of cost-effective environmental cleanup strategies. Summary …

… Metagenomic datasets could help map out microbial diversity … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their …

… By leveraging new tools and large-scale data mining, JGI researchers … genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … before this study. A statistical comparison of evolutionary trees built from mitochondrial and nuclear genomes showed …

… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … While are still working on finalizing the tree and related publication the tree is still in development and not … there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …

… For the first time, a team has comprehensively described host-virus dynamics in … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA … 1) Complete Sample Metadata form Sample metadata is collected via … any materials classified above NIH Biosafety Level 2. 3) Review Shipping Instructions After receiving shipping approval …