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Environmental Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative … at the University of California, Davis and UC Santa Barbara generated a list of prokaryotes with fermentative metabolism … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … Sciences and Energy Research Council of Canada (NSERC) Discovery Grant to PFD (2019-06265). This work was also …

… sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … of genes involved in environmentally significant metabolic pathways related to methane production, nitrogen fixation, … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology … JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and engineering. … PhD, Microbiology and … Google Scholar … Education … Awards and Service … Selected Publications …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, … in bacteria, making it difficult to identify which pathway corresponds to which metabolite. Finding a vehicle … CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad …

… carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from a hot spring that has the …

… crop breeders and researchers predict how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic …