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Comparative mitogenomics of kingdom Fungi – evolutionary insights and metagenomic applications
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Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of analysis would provide a … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi
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A Genomic Catalog of Stress Response Genes in Anaerobic Fungi for Applications in Bioproduction
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Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria
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