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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … An assay used for profiling transcription factor binding …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art … genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. … All proposals will be externally peer-reviewed for scientific merit, …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to … of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular … Lab). Using a single-cell screen, they can now identify microbes with specific functional characteristics. When they …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of … waters also contain higher concentrations of the essential trace metal zinc, compared to other oceans. That zinc turns … what makes polar photosynthesizers tick. He’s working with researchers at the U.S. Department of Energy (DOE) …
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Game On: High School Students Drive Everglades Metagenomics Study
… The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … gene from this untouched Everglade region. “The JGI has gone over-and-above throughout this research project,” said …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … SIP allows researchers to go beyond understanding which microbes are present in a sample, to generate data about …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … green sharpshooter. In 2012, single cells isolated from the microbes found in the oil plume from Deepwater Horizon oil …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Microbes and Climate Change: a Research Prospectus for the Future
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