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… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … process called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of with …

… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … challenges by using  in vitro -expressed TFs and fragmented genomic DNA, eliminating the need for living cells. This …

… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science …

… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … provides training and scientific contributions—including sequencing services and analysis—to participants. Over the …

… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… Outreach at JGI takes many forms: We offer internship opportunities through working directly with … Overall, our aim is to inspire students and established professionals to explore opportunities in STEM by providing … learning opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and …

… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … This allows for more accurate and detailed comparative genomic analyses.   The Impact There are 900 species of … South African team collected the plant tissues. DNA and RNA sequencing were conducted by the JGI, along with genome …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues … and nitrogen exchange between the lichen partners. This genomic and transcriptomic analysis has opened the door for …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … genes, but these genes mask the striking diversity of their genomic capabilities. According to Boeuf, 16S rRNA genes are … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial … the culmination of nearly a decade of work to develop genomic resources for drought tolerance in perennial …