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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … course materials and bioinformatics exercises are freely available through the links below. Naturalist Myco Ed …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … team then extended their analysis beyond the reference set, using two additional approaches. To search environmental …
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Investigation of Proposed Ladderane Biosynthetic Genes from Anammox Bacteria by Heterologous Expression in E. coli
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … sequence analysis tools is a means of expediting BGC and biosynthesis research.  Summary Over the years several …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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Vision, challenges and opportunities for a Plant Cell Atlas
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CTCF-mediated functional chromatin interactome in pluripotent cells
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One Bacterial Cell, One Complete Genome
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Sequencing of Genomes from Environmental Single Cells
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Assembling the Marine Metagenome, One Cell at a Time
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