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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene … have been generated using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Prokaryotic community profiles at different operational stages of a Greek solar saltern
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … that the ambiguity was exactly her point. “Things have one or another function that completely depends on the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Team Science Reveals Important Protein in Poplar
… for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of … This work was supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … a senior author of the paper. “This paper is the first one to survey a huge amount of natural diversity and say, …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … and importance in the fabric of our lives. In the United States, cotton production centers around two varieties: 95 … from this high impact science for years to come,” said Don Jones, who handles variety improvement for  Cotton …
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Eelgrass Proves to Be Much Younger Than We Thought
… years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community Sequencing …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species …
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … relationships are long-term biological interactions between one or more biological organisms. One hallmark of an …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … class of 18 juniors.  He got turned down consistently, with one of his favorite answers being, “It would take a team of … They extracted the DNA from the soil with Qiagen DNeasy PowerSoil Kits and sent the samples to the JGI for …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … 6. Q:How would field applications of the rhizoboxes mentioned in Jim Moran’s presentation work?   A: As long as we …
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