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Improved genome annotation for Zymomonas mobilis
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies …  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   The Impact This dataset …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … a large TPS gene family is well-conserved across eucalypts. Improved knowledge of the evolution and selection of this …
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Searching for new branches on the tree of life
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  … genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several papers and …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. Eventually, he added, the Genome Portal will be retired once the same features are …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom Fragilariopsis cylindrus . … from JGI CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   …
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New voyages to explore the natural product galaxy
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The birth of new exons: Mechanisms and evolutionary consequences
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … The HAL2 and FIL2 genomes are available on the JGI’s plant portal Phytozome .   …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern … associated genes are great resources for bioremediation, new agricultural applications or life-saving drugs. A better … and ferns. The genome is available on the JGI’s plant portal, Phytozome . Researchers hope to have demonstrated …
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