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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not just any host will do. … important environmental processes like  carbon fixation , nitrogen cycling and methane production. Meanwhile, …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The top image on the left …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility … sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, specifically for generating …
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Natural Prodcast Episode 15: Katherine Duncan
… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you are Kate Duncan? Or do you want to be Katherine Duncan or Dr. Duncan? Kate Duncan: Oh, goodness. I mean, if you were to find my scientific papers, that would be Katherine. Dan …
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Natural Prodcast Episode 16: Marcy Balunas
… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a pandemic so I’m no different than anyone else.  DAN: … Natural Prodcast presents our interview with Professor Marcy Balunas , currently at the … Connecticut ‘s Department of Pharmaceutical Sciences . This interview was conducted a few months ago, and since then Dr. …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for …   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. … shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as those that play a role in …
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Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes
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Transcriptomic analysis highlights epigenetic and transcriptional regulation during zygotic embryo development of Pinus pinaster
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s … oxygen deep below ground. These archaea fix carbon and nitrogen, but the viruses that infect Altiarchaea cause the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: hot spring-dwelling bacteria from … show the ability to respire with or without oxygen, fix nitrogen, and break down organic and inorganic compounds. …
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Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community
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The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
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