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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … array developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities … cell genomics expertise led to the identification of a new “oil-seeking” species related to Oceanospirillales , …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the human genome, an arms race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department Head and current ESnet Deputy …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the … and validation of the functional potential of these new lineages. …
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Graduate Students Get Thesis Research Opportunity at the JGI
SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving … projects after the JGI and KBase have settled into their new shared home, the Integrative Genomics Building at …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … end, a team of researchers led by Jeremy Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil … of North Dakota State University; Dan Rokhsar of the JGI; and Scott Jackson of the University of Georgia … classes of beans.” … P. vulgaris on Phytozome … Plant Datasets …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work builds off a longstanding partnership between the JGI and Oak Ridge National Laboratory, dating back to the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, they constantly collaborated with each other on new ways of presenting and researching science. …
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