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… This group is responsible for institutional strategic planning, talent management, and …

… that was used to clean up the toxic chemicals is commonly known as Enhanced Reductive Dechlorination (ERD.) It is … collected microbial samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were … the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team has also …

… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … microbiome metadata that follows community standards freely available, and enabling large-scale comparative genomics … While in the past, GOLD relied on free text fields, it now leverages controlled vocabularies with unit-based fields …

… relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US … recap of how plants, in general, work. KAROLINA:  We all know plants take up water through their roots. But for them … the JGI focuses on a group of plants called yuccas. If you know Joshua Tree, that’s an example of a yucca species. And …

… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … User Engagement Lead for the DOE Systems Biology Knowledgebase (KBase), as well as researchers from Pacific … gathered for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get into the nitty gritty with …

… a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference … sequenced, 15 that are in sequencing or assembly right now, and eight more that we are likely to take forward with …

… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … (JGI), a DOE Office of Science User Facility, for publicly available metagenome data provided by the other study … lineages, and the other five only distantly related to known methanogens. With the help of this information, the …

… States. They also provided multiple access points to the information. The team harnessed a community-science program to … the process. They noted this may be the first publicly available, river-focused microbial resource that provides … are key components of watershed ecosystems, where rain or snow drain into such bodies of water before heading out to …

… challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … more multidisciplinary teams. The work also paved the way for a longstanding collaboration between researchers at the … there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced …

… An assay used for profiling transcription factor binding sites across … samples in 96-well plates on automated liquid handler platforms, substantially increasing efficiency and scalability. … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …

… background on the various isotope-related technologies available at JGI and EMSL such as DNA-SIP, Protein SIP, Flux … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more … 12. Q:  Can JGI work with labeled RNA?  A:  Not right now but it’s on our radar.       …