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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … ) is a candidate bioenergy feedstock with a complex genome with multiple copies of its chromosomes. Switchgrass …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, …
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Finding the Fermenters
… including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. They also …
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Open Frameworks Training the Next Generation of Scientists
… involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to … study. This is because most fungal clades have no reference genomes. It’s a key problem to solve because fungi are very …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a spreadsheet into a flagship  genomic metadata … U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Ian Blaby
… Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP … et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for … and Biotechnology. 11. 2023 Liu et. al., Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems. …
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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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