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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases …
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … microbial lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, …
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Tanja Woyke
Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed …
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using …
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Special Initiatives & Programs
… of Illinois at Urbana-Champaign: Announced in July 2017, CABBI is a collaboration between Illinois’ Institute for … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. … The JGI … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program … the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … microbiome data science, and the development of new informatics tools specifically optimized for high-performance … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single largest … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using …
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