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Q:  To what extent is natural soil a limit to identify molecules exchanged between plants and microbiomes during … in the field. By having transcriptomics data across 2 years, as well as a second field trial (which will include a … see this  Metabolomics Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile …

… reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. … Niyogi KK, Schmutz J, Theg SM, Blaby-Haas CE, Merchant SS. (2021) Widespread polycistronic gene expression in green … PNAS  118 (7) e2017714118 Foflonker F and Blaby-Haas CE. (2021) Co-locality to co-functionality: Eukaryotic gene …

… biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … Cole led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … gene expression within circular capture areas roughly 55-microns in diameter — about the width of a human hair. At …

DNA synthesis and metabolomics capabilities to identify, express and characterize bioactive secondary metabolite … Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and have expanded … Report Card toolkit (HERC-tk) to enable users to identify the best host to express their BGC(s). This is based on …

… biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant … Cole led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … gene expression within circular capture areas roughly 55-microns in diameter — about the width of a human hair. At …

… to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the … Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231 (SR, APC, SN).  …

… writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the … column appears in six issues of the monthly magazine each year.  Until then, the column had been written solely by … their editor. The partnership has proven so successful this year, JGI is providing another three Genome Watch articles. …

DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. Submitted …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and finished … JGI’s single cell genomics capabilities to assemble, identify, and characterize more than 200 microbial genomes that …

… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo … precise genome editing. This means that scientists can modify gene expression, or delete genes, all with the rapid …

… related to energy and the environment several times a year. A few proposal calls have deadlines coming up – in …