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… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only … plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all …

… restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … And so now that’s what I’m joking about having a lot of data. It’s a lot of metabolomics data sets. So what have we …

… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept … genomes 17.  Q: How do we find the parameters, values and softwares/packages used by JGI to create these syntenic …

… The JGI User Executive Committee (UEC) recently welcomed three new … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … early career researchers and new users, advise on data release and sharing policies, and help develop programs …

… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of … in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … unaware that [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which …

… and combining the information with previously published datasets. The work was  recently published in the journal  … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still …

… learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics … of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …

… The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …

… trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA … all of this information. The JGI aims to create pipelines, tools and other standardized data resources that the global … up with JGI staff, collaborators and users to see how software and supercomputing capabilities have evolved to …