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… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley National … many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has progressed, … of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized …

… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … — had active proposals with us, along with more than 15,000 secondary users who made use of our data. We completed …

… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …