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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to take on … screens for characterization of new enzymes and use the data we generated to train machine learning models now …

… and analysis will be performed by the JGI at no cost to the user. … Prospective users with specific questions regarding their proposed …

… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not …

… engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No.  …

… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , DNA … phenotypic, metabolomic, imaging, sensor, and other data produced at scales amenable to statistical analysis. To …

… restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … And so now that’s what I’m joking about having a lot of data. It’s a lot of metabolomics data sets. So what have we …

… flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was … Data Collaborative where she leads infrastructure and user-centered design efforts. Dr. Fagnan was on the …

… and combining the information with previously published datasets. The work was  recently published in the journal  … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still …

… Lead position in 2009 and assumed the Deputy Director of User Program position in 2021. In addition to her JGI … Merced's School of Natural Sciences since 2015. Prospective users with specific questions regarding their proposed … the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's areas …

… recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). … the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research achievements that support open data practices, development of standards and processes for …