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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched …
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Methanomethylovorans are the dominant dimethylsulfide-degrading methanogens in gravel and sandy river sediment microcosms
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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … the JGI to further explore the ecological and evolutionary drivers of virus-host dynamics in soil microbial communities. … The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality and completeness of …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) … available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Microbial communities and biogeochemical functioning across peatlands in the Athabasca Oil Sands region of Canada: Implications for reclamation and management
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … world, encompassing 54 researchers from 14 organizations across nine countries. Learn more about the Hungate1000 work … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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JGI announces final round of 2022 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
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