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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. … Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Laboratory (Berkeley Lab), to fill in these gaps of knowledge. In a study published November 11, 2022, in Cell … analyzed over 80,000 biosynthetic gene clusters (BGCs) for synthesis of secondary metabolites, in line with the JGI’s …
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Partners
… and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data …
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Medium-Chain Fatty Acid Synthesis by “Candidatus Weimeria bifida” gen. nov., sp. nov., and “Candidatus Pseudoramibacter fermentans” sp. nov.
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Trichoderma sp. strain AM6 whole-genome guided untargeted metabolomics: Terpenoid backbone synthesis and modulation of VOCs in tea (Camellia sinensis L.)
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Open Frameworks Training the Next Generation of Scientists
… involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are both supported … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & … emphasize how the research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … dispersal in wild populations for the first time.  “To our knowledge, nobody has ever discovered a dispersal gene that … high heat while C3 crops have become less efficient at photosynthesis, a concern as extreme weather events become more …
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JGI announces 2023 CSP Functional Genomics awardees
… , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … allowed the expansion of switchgrass’ ecological niche. The knowledge gained from 8X switchgrass is a valuable resource … shifts. (C4 plants use a more efficient form of photosynthesis that reduces water loss, compared to the process …
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JGI announces final round of 2022 Functional Genomics awardees
… , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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