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Calculating the Costs of Multiple Switchgrass Gene Copies
… range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Partners
… science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, … DOE computational facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data …
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Scientific Advisory Committee
The Scientific Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and … SAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the … from the DOE Office of Biological and Environmental Research (BER) program, set the final sequence allocation …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of … User Facilities, is a legally binding contract.   All User researchers must have their home/employing institution sign … the new User Agreement will replace the active version. For researchers with a Howard Hughes Medical Institution (HHMI) …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … a Professor of Genetics, Genomics and Development after his research interests shifted from condensed matter physics to …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called … heavily invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool …
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JGI announces 2023 CSP Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the …
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