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JGIota: Sequencing Shiitakes with David Hibbett
… the kind of decay that makes shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, guidance, and counsel on the … nor does it direct the JGI CIO or the JGI Director on how to operate and manage informatics efforts at the JGI. …
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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the … nor does it direct the Programs’ management teams on how to operate and manage the Programs. …
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Evolution of a Fungal Gene Expression Regulator
… or 5mC. In many organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes … University of Georgia provided sequencing and computational resources, respectively. This work was supported by the …
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Understanding Wildfire Recovery, Starting in Soil
… paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. To get a … a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, … Collaborations for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory …
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2024 Progress Report
… the community through responsibly managing our people and resources.     Director's Perspective Over the last year, … Revio. They enable increased capacities and faster sequencing, and at the same time help us manage costs. We … presented and attended meetings around the world to showcase the JGI’s science and what we enable for our users. …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … to human health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. …
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Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from academia, industry, and … Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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JGI Mural
… about the science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based artist Nigel Sussman. It was dedicated at the 2022 JGI Annual …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … specific sequence of these four letters represents an organism’s genetic code, or genome, which underlies physical … genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan …
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DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes
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