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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … microbiome activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and … is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to … Pennacchio, Project Management Office. For questions about the appropriateness of projects or experimental …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … scores of nurseries across the nation, elevating concerns about the pathogen to an all-time high. California … health of the tree. While drought conditions may slow the progress of SOD, the debilitated trees become susceptible to …
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Metabolomics Program
… are crucial for advancing the bioeconomy, environmental sustainability, and improving bioenergy crops. … The Metabolomics Program is focused on understanding the critical roles of metabolites in … as they relate to DOE missions in the bioeconomy, sustainability, and environmental research. This program …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that … [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the …
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2025 NeLLi Symposium
… microbial symbiosis.  This is a continuation of the previous NeLLi Symposia. In this 2025 Symposium, we will showcase … as well as microbial symbioses. We aim to foster discussions centered on how to capture, define, quantify, and … and other technological developments leveraging recent progress in AI/ML that will enable researchers to discover …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … than 130 implementation milestones to help track and drive progress toward the overarching goals and vision. The plan … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) … as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus … ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an estimated $4 …
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Ray Turner Completes Last Tour of Lab Duty at JGI
JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For … Ford (Operations Area Deputy/Berkeley Lab Deputy Chief Operating Officer). “You define the word ‘collegial’” “Every … is still good. “I noticed right away,” said Ellen Ford about Ray’s personal impact on her, “that you started …
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