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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … be applied to biotechnology and medicine. A more robust understanding of these microbial communities could lead … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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JGI@25: From Life at the Extremes to Editing Genomes
… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of that first – and subsequent – meetings is here .) Working with the JGI, Banfield is a pioneer in metagenomic …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … Biochemistry, Microbiology) Jeremy Schmutz (Cross-field) Susannah Tringe (Microbiology) Tanja Woyke (Biology and … issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein function within …
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Genome organization and botanical diversity
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Unveiling plasmid diversity in nature
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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A User-Centered Approach to Accessing JGI Data
… plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift in … current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY … Members from across Berkeley Lab gathered to learn more about planting and tending these shoots of their own. The …
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JGI@25: Building a Better Bean
… may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … Schmutz explained, meaning the plant’s reduced genetic diversity makes it easier to genetically manipulate. One … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been … that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … to this call may be submitted to the JGI at any time using a simple web-based form and are reviewed annually. For …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … UC Merced School of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to … most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have access to …
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