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Natural Prodcast Episode 18: A CSP Primer
… We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual … call where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a … high throughput sequencing capabilities. Such as sending us 20 DNA samples is also not a good fit for JGI, even for the …
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Natural Prodcast Episode 8: Eric Schmidt
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Supercharging SIP in the Fungal Hyphosphere
… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is …
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High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Special Initiatives & Programs
… the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls below … may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar metabolomics samples, and should … that seeks to reduce U.S. gasoline consumption by 20% within 10 years through increased efficiency and …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant signs of … of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is …
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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … I’m going to learn microbiology. So I went to– this was in 2008 by then. And I’ve never done– I mean, I think I did … for Marine Science. And then I started my own group in 2016. And it very much ties in all of those experiences, you …
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… activity in microbiomes. The initial analysis used over 12,000 metagenomes from diverse environments and grouped … data (the 136 tetranucleotide frequencies for each of the 12,063 metagenomes) and reduce it into two axes (LDA … US Department of Energy operated under Contract No. DE-AC02-05CH11231. This research used resources of the National …
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