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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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W. Berkeley Kauffman
… user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic …
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Gene Expression: From On-Off Switch to Dial
… to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene expression allowed researchers to identify variations of essential genes in metabolic networks that were missed using traditional approaches. This …
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Matthew Kellom
… between microbial life and environment, and using metagenomics to study these complex natural systems. … places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … onto a specific target on the microbial cell’s membrane. Two decades ago, a team discovered a group of viruses that … support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used herein was …
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Ian Blaby
National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … approach to reveal the functional links between gene networks. BMC genomics. 20:12. 2019 Anderson et. al., … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or … and flowering plants had adapted to their environments, two gene families—peroxidases and nucleotide-binding …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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When “The Blob” Made It Hotter Under the Water
… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave event … of the United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures by a …
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A Complex Confection Decoded: Sugarcane Reference Genome
… crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …
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