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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have … found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in … Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … planning workshops, as well as collecting extensive input from all JGI staff, Biosciences and Berkeley Lab leadership, …
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Access to Rock Star Scientists
… the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research …
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Three Join the JGI User Executive Committee
… Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of … and help develop programs to increase participation from minority-serving institutions in JGI user programs. The … Greenham stepped down at the end of her term. In late 2023, the JGI launched a solicitation for nominations for …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a … in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … symbionts in sulfur-rich mangrove sediments not far from his lab when he first encountered the bacteria. “When I …
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JGI at the AGU Fall Meeting
… the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting here. Here are some … User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST Convention …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are hermaphrodites, … the study’s international team, which included scientists from Oak Ridge National Laboratory and the U.S. Department …
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Four Researchers Join JGI User Executive Committee
… Bik of the University of Georgia, Greg Bonito of Michigan State University, Jonathan Eisen of the University of California, Davis, and Michael … Kristen DeAngelis will serve as the Past Chair.  Aside from the duties described above, the UEC also contributes to …
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VEGA Symposium
… Bird rates available now General & Berkeley Lab Attendee – $250 Students & Postdocs – $200 Regular Rates (begin … the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place November 18-19, 2026 on the UC Berkeley campus. Organized every two years since 2018, the goal of this …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … His research activity is focused on developing and implementing new technologies and methodologies that … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with …
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