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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable … and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales …
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Partnerships: Myco-Ed
DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The … analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or … is required to perform computational analyses. The Mycocosm user interface is designed for use by mycologists and …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … was to decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem with a …
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Genomes OnLine Database (GOLD) v.8: overview and updates
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … here about the “Facilities Integrating Collaborations for User Science” (FICUS) program. Letters of Intent are due …
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UC Merced Interns Reflect on Their JGI Summer Projects
… past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The … Google Docs, and GitHub enabled virtual collaboration. JGI also hosted events to enable students to showcase their …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the …
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JGI Workshops at PAG
… we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from … We will describe how to apply for a project with the JGI Community Science Program and how you can use the KBase …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual … by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders … and graduate students from UC Merced with at least one JGI mentor. Together, they work through a specific project …
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