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A Natural Mechanism Can Turbocharge Viral Evolution
… cells. Since that discovery, DGRs have been found in other viruses, bacteria, and archaea. But how widely … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … might then harness them as molecular tools for research and industry applications. Summary In their recently published …
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iPHoP: A Matchmaker for Phages and their Hosts
… nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, … and number of datasets for human microbiome data. In other environments, such as terrestrial soil, having …
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Gene Expression: From On-Off Switch to Dial
… this experiment outlines a roadmap that is transferable to other systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary … Camille and Henry Dreyfus Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … side, and if the run-off might have affected the results. Another idea was to study the different methane-producing …
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How to Submit Sequencing Samples
… of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment to … sent in JGI-supplied tubes/plates will be returned to the user. PLEASE NOTE: The JGI will not accept any materials …
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JGI@25: Studying Sorghum’s Survival Skills
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … Sorghum has an important feature in common with certain other cereal crops: It performs C4 photosynthesis, which is … of sorghum begins. Enabled by the JGI’s Community Science Program, Todd Mockler and his team collect diverse lines of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … I was not sure we could even complete a full project. Every other group I contacted was happy to offer advice but … reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, I was …
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How To Use Our Systems
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How Filamentous Fungi Sense Food
Filamentous fungi are also being used in the biotechnology industry to produce enzymes, proteins, and other chemicals. Summary Filamentous fungi are like handymen … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Comparative genomics of the extremophile Cryomyces antarcticus and other psychrophilic Dothideomycetes
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Better Genome Editing for Bioenergy
… to validate their set of guide RNAs could be applied to other non-conventional organisms. Summary According to … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to identify which …
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