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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …
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Microbiome Data Science: Understanding Our Microbial Planet
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Exabiome: Advancing Microbial Science through Exascale Computing
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use …
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