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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … we don’t recognize, because the only way to find things is by comparison. We’ll talk about that when we talk about …
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee is chartered to render advice, …
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Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… carbon cycle, and are of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The … applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. …
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Polyphenol rewiring of the microbiome reduces methane emissions
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re looking at: the role viral infection may play in other natural ecosystems. The …
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Programs & Platform Leads
… a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive … for energy and infrastructure security. In complement to the Community Science Program, JGI researchers drive … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … matter, and their rumen are highly capable of breaking down potential biomass sources in ways we are only just beginning … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using …
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to … use a variety of approaches to match a virus with a potential host. This can result in different predictions. …
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