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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint … (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly …
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Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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The Metadata Coverage Index (MCI): A standardized metric for quantifying database metadata richness
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Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
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Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the … , proposed data usage by the applicant/community, and track record of the applicant.  Learn about the general review …
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Coral mucus rapidly induces chemokinesis and genome-wide transcriptional shifts toward early pathogenesis in a bacterial coral pathogen
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … large metabolite databases by running 1000s of metabolite standards, and development of high-throughput untargeted … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the … Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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