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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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Towards a balanced view of the bacterial tree of life
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Toward a standard in structural genome annotation for prokaryotes
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one … Lead at the JGI, responsible for the data management infrastructure of the Integrated Microbial Genomes (IMG) … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC … flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … the National Microbiome Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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Identifying genomic data use with the Data Citation Explorer
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Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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