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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A toolkit for microbial community editing
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … Cone Pool in Mono County, California, scientists have used sequencing methods for the first time to comprehensively … of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and … cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … developed between the two institutions to help train the next generation workforce. Co-advised by JGI Microbial Program …
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Chapter Twelve Genomics for Key Players in the N Cycle From Guinea Pigs to the Next Frontier
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Identifying genomic data use with the Data Citation Explorer
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High-resolution phylogenetic microbial community profiling
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …
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Protein structure determination using metagenome sequence data
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BioPig: a Hadoop-based analytic toolkit for large-scale sequence data
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