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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of … and energy genomics. Click on the images below to learn about the science depicted. The two-story JGI mural was …
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Emiley Eloe-Fadrosh
… environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to … Nature Microbiol. 4: 1895-1906. Roux S, et al. 2019. Minimum information about an uncultivated virus genome … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … fungal genomes covering the entire kingdom of fungi. “The information from this project may also have a practical … Grigoriev at the JGI strongly influenced her perspective about what it means to be a scientist. “To see how team …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in … in repetitive DNA and transposons in methylated cytosine clusters (MCCs – similar to the MAC clusters for 6mA), …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of … and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect from …
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Complete genome sequence of Thermosphaera aggregans type strain (M11TLT)
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their … with the JGI on their research. Click below to learn more about our individual Science Programs.  … Deputy of Science …
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SpaRC: scalable sequence clustering using Apache Spark
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Poisson hurdle model-based method for clustering microbiome features.
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   … of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these … often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or … plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an …
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Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
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