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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … aim is to generate high-quality genome assemblies and annotations for 35 species representing all major … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … late great Warp Drive Bio, a biotech startup where we did genome mining together. Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … of work; as sequencing technologies advanced, assembly and annotation of the genome sequence improved in parallel. The switchgrass genome sequence is …
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John Vogel
… of transgenic switchgrass lines in an effort to create improved varieties for biomass production. He did his … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional … User Project Coordination Rekha Seshadri,  Functional Annotation Group Natalia Ivanova, Functional Annotation Lead …
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High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
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Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria
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Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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