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… Uncovering associations between plant roots and fungi that can help or … roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. …

… A deep dive into microbial genomics reveals one bacterial … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, metatranscriptomes …

… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… Congratulations to US Department of Energy (DOE) Joint Genome … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the … The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our …

… The Secondary Metabolism Collaboratory encourages user engagement. The … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …

… Analysis of haloarchaeal metagenomes broadens understanding … cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme … This work was supported by the Australian Research Council … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …

… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. … the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities of flavin …

… DAN: You’re listening to the US Department of Energy Joint … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … some, you know, major historical events and craziness in human history.  ALISON: Yeah, that natural products could be …

… Virophages are small viruses with double-stranded DNA genomes that … & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …

… Large-scale comparative analysis leads to identification of … with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… 2024 was a year of firsts, including the flagship internship program … Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with …   Want to see past projects? Read more below         …   Internship Snapshots …