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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to … as an environmentally sustainable and cost-effective biomass for production of renewable fuels and chemicals.  …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo … the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses around us is vast, and we … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational …
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Genome biology of the paleotetraploid perennial biomass crop Miscanthus
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status … with the JGI Investigators interested in translating genomic information to biological function Investigators …
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Comparative Analysis of 126 Cyanobacterial Genomes Reveals Evidence of Functional Diversity Among Homologs of the Redox-Regulated CP12 Protein    
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and …
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Harnessing Genetic Diversity in Saccharomyces cerevisiae for Fermentation of Xylose in Hydrolysates of Alkaline Hydrogen Peroxide-Pretreated Biomass
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … to learn more about the program's areas of focus, major initiatives and more.  …
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Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
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