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… fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …

… fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused on stable and … flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and …

… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …

… microbe, tucked in the fungus’ tissue. If you’re a Marvel Comics fan, you might liken the symbiotic relationship … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … the JGI contributed to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  MycoCosm …

… Large-scale comparative analysis leads to identification of biosynthetic gene … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … genome or MAG and press a button to build a model from our database of mappings between biochemical reactions and …