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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … for plant genomes. They are annotated with the JGI Plant Annotation pipeline, which provides high quality comparisons … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition.
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Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Rex Malmstrom
… group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites
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User Support Analysis Group
… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work … new product types, to the development of automated analysis pipelines for standard sequencing products performed at …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Workforce Development & Education Outreach
… partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a similar …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … Comparative Analysis group, and is responsible for genome annotation, comparative analysis and data distribution for … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa
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