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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal … function of these two isolates. The combined taxonomic and functional annotations were used to predict the final end …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental … FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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High-Throughput Functional Genomics for Energy Production
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MicrobesOnline: an integrated portal for comparative and functional genomics
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A segmental genomic duplication generates a functional intron
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Webinar: MycoCosm Tutorial
… see only that part of the tree  (see full answer on video) 4.  Q: Will it support custom columns in the future? For … While are still working on finalizing the tree and related publication the tree is still in development and not … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within …
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Game On: High School Students Drive Everglades Metagenomics Study
… made coring devices, then planned and collected from 4 sites with 5 replicates. They extracted the DNA from the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … a deeper understanding of both the research process and metagenomics while legitimately contributing to the body of …
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Natural Prodcast Episode 17: Cassandra Quave
… she has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend … that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Natural Prodcast Episode 6: Marc Chevrette
… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … the DNA that was breaking the sequencing from really being functional was these secondary metabolite pathways. So why … the United States in … I forget the number, but it’s over 42, 43 states, but we’re also in many countries, including …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. Those from the JGI whose publications rank in the top 1% by citations for field and … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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