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JGI Portals
… The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric analyses of fungi and …
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Graduate Students Get Thesis Research Opportunity at the JGI
… mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … have access to unique lab resources. Berkeley Lab is the home to an exceptional caliber of scientists.” For her … System,” she will work with Susannah Tringe, JGI’s User Programs deputy and head of the Microbial Systems group. …
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Adina Howe
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Axel Visel
… Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven science … direction, leadership, and oversight for all JGI scientific programs. The Deputy of Science is also responsible for …
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Nikos Kyrpides
… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and … group is developing novel methods for enabling large-scale comparative analysis, as well as mining and visualization of …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… mass spectrometry-based measurements of primary and secondary metabolites from plants, microorganisms, and … on a peer-reviewed competitive basis via its  User Programs . Q:  Are applicants outside of JGI eligible to apply for CSP?  I am at NIST. A: The JGI User Programs are designed to be available to academic, …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… marine  Chloroflexota lost when they returned to an ocean home. A deeper understanding of how these bacteria evolved … environments of extremes, where both temperatures and pH levels vary wildly from spring to spring. These biodiversity …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American … among the Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI scientist to receive the van Niel Prize; the …
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Dan Rokhsar
… genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this …
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Publication Policy
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Webinar: PhycoCosm Tutorial
… collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  … We also have some reference plant genomes to help with comparative studies of algae and we have various protists such as oomycetes. We think they’re valuable for comparative studies (see video for Alan’s response)     …
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Defining a Pan-Genome for Antarctic Archaea
… use. Summary Conditions such as extreme cold, high levels of salinity and the sheer distance from other parts … primary replicon (chromosome) that is highly conserved and secondary replicons that are highly variable but organized …
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