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… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … between three different principal investigators (PIs) harnessed JGI’s DNA synthesis capability to better … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to …

… category Prokaryote Super Program head Nikos Kyrpides , Biology & Biochemistry category Computational … to learn more about the project. Natalia Ivanova, Nikos Kyrpides, Susannah Tringe and Tanja Woyke were part of a JGI …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota … fungi suggested that there were multiple flagellum loss events during the diversification of terrestrial fungi, … that there were a series of rapid diversification events when fungi first invaded land. Intuitively, it makes …

… in, and many different products out, instead of the more typical, one enzyme, one product. At each step, the zealexin … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  … a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a …

… DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … 13 granted patents, 33 pending. Includes: Enhancing spinosyn production with oxygen binding proteins. (2014) U.S. … Application US8741603 Fermentative vitamin C production. (2012) U.S. Patent Application US8318462 Fermentation …

… this project may also have a practical relevance with helping to synthesize codon-optimized fungal genes for various … Last summer, Wint hosted a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help … interns and their mentors, and Wint is slated to lead the workshop again in the 2022 program. “I’m excited — I’m …

… internship program was founded in 2014 with the goal of inspiring students to embark on a career in genomics and to … stories, told through print narratives, videos, a podcast episode, and presentations below. … Implementing a Scalable JGI-RQC Pipeline on the Cloud …

… creation protocols for PacBio? A(nswer):  Regular PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are … deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) … custom analysis, i.e. is not part of the standard analysis pipeline but can be done on request by the PI. We currently …

… in genome projects and organized numerous genomics workshops. … et al  (2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists.  … mosaicism and the fate of nucleomorphs.  Nature . 2012; 492: 59-65. Floudas D et al. The Paleozoic origin of …

… leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and … Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council …

… on 3.  Q(uestion): Can you please explain again how did you pick genomes to be on the genomes portal? For the taxa I … for the answer provided by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through … on the synteny page. 7.  Q: What is the success rate for CSP? What makes a successful CSP? A: Reminder: two calls for …