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For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the …

… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … generate from carbon dioxide they take in. In this way, encouraging this symbiosis could improve the way soils store …

… revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of biomass …

… in the process. If you have any questions, please contact your Project Manager or [email protected] . … 1) … the importance of proper nucleic acid quantification in our Illumina and PacBio sequencing workflows and provide … (or for metagenomes, sample names).  Need help naming your organisms? See our Taxonomy Quick Guide. PM sends PI the …

What if we understood plants and how they adapt to their ever-changing … But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … and KBase issued a call for proposals in biological data science as part of the FICUS initiative. Proposals submitted …

… process by better understanding the capabilities and resources available for your project. Watch all the webinars here . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced Photon …

Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the …

… the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely … published in  The Proceedings of the National Academy of Sciences bridges this gap, by tracing the evolution of a … across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence … Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or …

The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the science depicted. The two-story JGI mural was commissioned …