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Natural Prodcast Episode 2: The Primer, Part 2
… bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of different organisms that produce … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … who was working on these things in the very early 1900s.  DAN: And so he has drawn what he called …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix …
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Microbiome Data Science Team
… the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … of recording information about 'legacy' parts.  … The guideRNA and Sequence Extraction Tool (gRNA-SeqRET) was …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted … offerings, capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For … metabolomics samples, and should generally conform to the guidelines for our  CSP Large Scale call .  Process …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … staying up to date via our website, social media, and newsletter. Q:  How would people find out about the NEON … product, you can read more and download the protocol and guidelines. … The U.S. Department of Energy Joint Genome …
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Natural Prodcast Episode 11: Marnix Medema
… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Webinars on Offerings & Capabilities
Photon Source when applying to the FICUS call. (Feb. 21, 2024) More JGI webinars below …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise … probably heard of the Salem Witch Trials back in the what? 15th, 16th century.  ALISON: Yeah, I lived in Massachusetts …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … people what that number is. BETSY PARKINSON: So micromolar, 10 to the negative 6th. Nanomolar, 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation Process (WIP) …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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