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New Lineages of Life Group
… Developing rapid and accurate methods for identifying potential … Our team develops and implements advanced methods for rapid detection and characterization of potential biological … marine ecosystems .”  The ISME Journal , Volume 18 Issue 1. Pitot, T.M., et al (2024) “ Conservative taxonomy and …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A … National Laboratory (Berkeley Lab) describe a computational pipeline that can specifically scan for those snowflakes, or … also working on RNA virus mining. After a couple of virtual meetings of the three teams it was clear that a larger …
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Integrating Experimentation with Data
… the Seattle Marriott Waterfront in Seattle, Washington.  Topics included:  Environmental Microbiomes Biodesign and … sessions, thought-provoking flash talks, and instructive workshops. The abstract submission deadline has passed.    …
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Eelgrass Proves to Be Much Younger Than We Thought
… flourishes. The plant can thrive in both frigid and tropical climates, growing off the coasts of Alaska and Norway, … its chromosomes.  Over time, the new and old chromosome copies begin to diverge and mutate relative to one another. … Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …
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Crops as Tough as World Cup Turf
… just happened to be the same species that covered World Cup pitches in 2022.                     …
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First Monoploid Reference Sequence of Sugarcane
… challenging. The reference sequence is useful for mapping the genes involved in sugar production and for … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … in part on these positive results, in 2017, JGI approved a CSP proposal from the international team to complete the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … on the sample. However, we don’t do this because they typically contain salts and other contaminants that interfere … . Q:  Are applicants outside of JGI eligible to apply for CSP?  I am at NIST. A: The JGI User Programs are designed to …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present …
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How Filamentous Fungi Sense Food
… a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … is that the poplar cuttings had increased expression of lipid signaling genes when they were inoculated with  M. elongata . Poplar might be detecting lipids from  M. elongata;  the fungus produces them so …
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Computationally Classifying Fungal Lifestyles
… enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the … In just two months, the students participated in networking workshops, data carpentry hackathons, and also made new … here.” Mentor: Lorenzo Aureli Project: “ Exploring the epigenetic basis of pathogenicity in bacteria” Erika …
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