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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes … take on certain functions at the forest floor. For the first time, they compared three different fungal guilds in a …
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Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light
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Novel bacterial clade reveals origin of form I Rubisco
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to … The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … approach to isolate cellulose-degrading microbes. They first bound single microbes to fluorescently labeled …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … features to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … the article comes out — about two months after the first draft. Woyke has so far selected the authors of these …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … “Give me six hours to chop down a tree and I will spend the first four sharpening the axe.” In this study,  published …
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Back in the Lab: the 2023 Summer Intern Experience
This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to … from Arctic permafrost. But to see what they’re doing, he first needs their DNA.   …
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Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution
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Increasing the Thermodynamic Driving Force of the Phosphofructokinase Reaction in Clostridium thermocellum
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